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List: r-sig-mac
Subject: [R-SIG-Mac] *** caught bus error *** address 0x1143d2c7b,
From: "Richard R. Liu" <richard.liu () pueo-owl ! ch>
Date: 2009-12-08 0:15:47
Message-ID: 8FAF9B30-3E96-46A9-AA3F-AD624CB43318 () pueo-owl ! ch
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Using R version 2.10.1 RC (2009-12-06 r50681) in 64-bit mode (R.app
GUI 1.30 (5528) x86_64-apple-darwin9.8.0) on a MacBook Pro 17" unibody
early 2009 with 8GB RAM. The following code is causing the error
message "*** caught bus error *** address 0x1143d2c7b, cause 'non-
existent physical address'"
> library(filehash)
> db <- dbInit("/Volumes/Work on RDR Test Documents/R Databases/
DB_TXT", type = "RDS")
> dbLoad(db)
>
> sent.all <- unlist(sentences.all)[-index.tokenless.sentences]
> i.samp <- sample(c(1:length(sent.all)), 100)
> sent.all[which(sentences.most.predicted.rf_003_2009.12.07[i.samp]
== F)]
sentences.all is a data frame in the filehash database. It is loaded
into the environment with the dbLoad statement. More precisely, it is
"lazy loaded."
If I first assign
which(sentences.most.predicted.rf_003_2009.12.07[i.samp] == F) to,
say, iF, then evaluate sent.all[iF], the error does not occur.
I thought I solved this problem the last time it plagued me by
downloading the source from CRAN instead of the binary. I did that
again before attempting to reproduce the error, but this time it
didn't help. I wish I could supply more information, but the error
message isn't at all helpful.
I only suspect filehash because (a) it evidently hasn't be updated in
a while, and (b) the lazy loading mechanism could be playing a role,
even though the statement sent.all <- unlist(sentences.all)[-
index.tokenless.sentences] seems to create a copy.
Can anybody suggest how I can at least identify where the error is
actually occurring? I am not a programmer, have not debugging tools
installed, could probably install one, but would need very detailed
instructions about using it.
Thanks,
Richard
Richard R. Liu
Dittingerstr. 33
CH-4053 Basel
Switzerland
Tel.: +41 61 331 10 47
Mobil: +41 79 708 67 66
Email: richard.liu@pueo-owl.ch
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