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List: postgis-users
Subject: [postgis-users] update postgis an problem pg_dump vacuumdb
From: Alain Benard <alain.benard () inrae ! fr>
Date: 2021-04-06 8:12:09
Message-ID: 37d3b2e56e174cd1ba1c5132a6d13a93 () IDFDCPRIPEXMU06 ! inra ! local
[Download RAW message or body]
Hi,
We are working with Centos 8 / Postgres 12.5 and postgis 2.5 and last week =
(30 March) an update modified the following packages:
update:
gdal32-libs-3.2.2-13.rhel8.x86_64
geos39-3.9.1-1.rhel8.x86_64
libgeotiff16-1.6.0-2.rhel8.x86_64
libgeotiff16-devel-1.6.0-2.rhel8.x86_64
libspatialite50-5.0.1-2.rhel8.x86_64
libspatialite50-devel-5.0.1-2.rhel8.x86_64
postgis25_12-2.5.5-4.rhel8.x86_64
postgis25_12-client-2.5.5-4.rhel8.x86_64
postgis25_12-docs-2.5.5-4.rhel8.x86_64
postgis25_12-utils-2.5.5-4.rhel8.x86_64
installed:
proj80-8.0.0-1.rhel8.x86_64
Completed !
Since this date our backup script has crashed randomly on the vacuumdb or p=
g_dum commands with messages such as the following:
LOG: server process (PID 1750919) was terminated by signal 6: Aborted
LOG: terminating any other active server processes
WARNING: terminating connection because of crash of another server process
DETAIL: The postmaster has commanded this server process to roll back the c=
urrent transaction and exit, because another server process exited abnormal=
ly and possibly corrupted shared memory.
HINT: In a moment you should be able to reconnect to the database and repea=
t your command.
the pg_dump command which crashes is not on a particular base and by replay=
ing the dumps one by one all the bases can be saved (sometimes after one or=
more crashes).
If I try to cancel the March 30 update I get:
dnf history undo xx
Installer proj80-8.0.0-1.rhel8.x86_64 @pgdg-common
Upgrade gdal32-libs-3.2.2-13.rhel8.x86_64 @pgdg-common
Upgraded gdal32-libs-3.2.1-1.rhel8.x86_64 @@System
Upgrade geos39-3.9.1-1.rhel8.x86_64 @pgdg-common
Upgraded geos39-3.9.0-1.rhel8.x86_64 @@System
Upgrade libgeotiff16-1.6.0-2.rhel8.x86_64 @pgdg-common
Upgraded libgeotiff16-1.6.0-1.rhel8.x86_64 @@System
Upgrade libgeotiff16-devel-1.6.0-2.rhel8.x86_64 @pgdg-common
Upgraded libgeotiff16-devel-1.6.0-1.rhel8.x86_64 @@System
Upgrade libspatialite50-5.0.1-2.rhel8.x86_64 @pgdg-common
Upgraded libspatialite50-5.0.1-1.rhel8.x86_64 @@System
Upgrade libspatialite50-devel-5.0.1-2.rhel8.x86_64 @pgdg-common
Upgraded libspatialite50-devel-5.0.1-1.rhel8.x86_64 @@System
Upgrade postgis25_12-2.5.5-4.rhel8.x86_64 @pgdg12
Upgraded postgis25_12-2.5.5-2.rhel8.x86_64 @@System
Upgrade postgis25_12-client-2.5.5-4.rhel8.x86_64 @pgdg12
Upgraded postgis25_12-client-2.5.5-2.rhel8.x86_64 @@System
Upgrade postgis25_12-docs-2.5.5-4.rhel8.x86_64 @pgdg12
Upgraded postgis25_12-docs-2.5.5-2.rhel8.x86_64 @@System
Upgrade postgis25_12-utils-2.5.5-4.rhel8.x86_64 @pgdg12
Upgraded postgis25_12-utils-2.5.5-2.rhel8.x86_64 @@System
No gdal32-libs-3.2.1-1.rhel8.x86_64 packages are available.
Error: no matching package
Thank's for advance for your help.
Alain
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<p class="MsoNormal">Hi,<o:p></o:p></p>
<p class="MsoNormal">We are working with Centos 8 / Postgres 12.5 and postgis 2.5 and \
last week (30 March) an update modified the following packages:<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt">update:<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt"> \
gdal32-libs-3.2.2-13.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> geos39-3.9.1-1.rhel8.x86_64<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt"> \
libgeotiff16-1.6.0-2.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> \
libgeotiff16-devel-1.6.0-2.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> \
libspatialite50-5.0.1-2.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> \
libspatialite50-devel-5.0.1-2.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> \
postgis25_12-2.5.5-4.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> \
postgis25_12-client-2.5.5-4.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> \
postgis25_12-docs-2.5.5-4.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> \
postgis25_12-utils-2.5.5-4.rhel8.x86_64<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt">installed:<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> proj80-8.0.0-1.rhel8.x86_64<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt">Completed !<o:p></o:p></p> <p \
class="MsoNormal"><o:p> </o:p></p> <p class="MsoNormal">Since this date our \
backup script has crashed randomly on the vacuumdb or pg_dum commands with messages \
such as the following:<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt">LOG: server process (PID 1750919) was terminated by signal \
6: Aborted<o:p></o:p></p> <p class="MsoNormal" style="margin-left:35.4pt">LOG: \
terminating any other active server processes<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt">WARNING: terminating connection because of crash of \
another server process<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt">DETAIL: The postmaster has commanded this server process \
to roll back the current transaction and exit, because another server process exited \
abnormally and possibly corrupted shared memory.<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt">HINT: In a moment you should be able to reconnect to the \
database and repeat your command.<o:p></o:p></p> <p class="MsoNormal">the pg_dump \
command which crashes is not on a particular base and by replaying the dumps one by \
one all the bases can be saved (sometimes after one or more crashes).<o:p></o:p></p> \
<p class="MsoNormal"><o:p> </o:p></p> <p class="MsoNormal">If I try to cancel \
the March 30 update I get:<o:p></o:p></p> <p \
class="MsoNormal"> \
dnf history undo xx<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Installer \
proj80-8.0.0-1.rhel8.x86_64 \
@pgdg-common<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgrade \
gdal32-libs-3.2.2-13.rhel8.x86_64 \
@pgdg-common<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgraded \
gdal32-libs-3.2.1-1.rhel8.x86_64 \
@@System<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgrade \
geos39-3.9.1-1.rhel8.x86_64 \
@pgdg-common<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgraded \
geos39-3.9.0-1.rhel8.x86_64 \
@@System<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgrade \
libgeotiff16-1.6.0-2.rhel8.x86_64 \
@pgdg-common<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgraded \
libgeotiff16-1.6.0-1.rhel8.x86_64 \
@@System<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgrade \
libgeotiff16-devel-1.6.0-2.rhel8.x86_64 @pgdg-common<o:p></o:p></p> \
<p class="MsoNormal" style="margin-left:35.4pt"> Upgraded \
libgeotiff16-devel-1.6.0-1.rhel8.x86_64 @@System<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt"> Upgrade \
libspatialite50-5.0.1-2.rhel8.x86_64 \
@pgdg-common<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgraded \
libspatialite50-5.0.1-1.rhel8.x86_64 \
@@System<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgrade \
libspatialite50-devel-5.0.1-2.rhel8.x86_64 @pgdg-common<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt"> Upgraded \
libspatialite50-devel-5.0.1-1.rhel8.x86_64 @@System<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt"> Upgrade \
postgis25_12-2.5.5-4.rhel8.x86_64 \
@pgdg12<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgraded \
postgis25_12-2.5.5-2.rhel8.x86_64 \
@@System<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgrade \
postgis25_12-client-2.5.5-4.rhel8.x86_64 @pgdg12<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt"> Upgraded \
postgis25_12-client-2.5.5-2.rhel8.x86_64 @@System<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt"> Upgrade \
postgis25_12-docs-2.5.5-4.rhel8.x86_64 @pgdg12<o:p></o:p></p> \
<p class="MsoNormal" style="margin-left:35.4pt"> Upgraded \
postgis25_12-docs-2.5.5-2.rhel8.x86_64 \
@@System<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt"> Upgrade \
postgis25_12-utils-2.5.5-4.rhel8.x86_64 @pgdg12<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt"> Upgraded \
postgis25_12-utils-2.5.5-2.rhel8.x86_64 @@System<o:p></o:p></p> <p \
class="MsoNormal" style="margin-left:35.4pt">No gdal32-libs-3.2.1-1.rhel8.x86_64 \
packages are available.<o:p></o:p></p> <p class="MsoNormal" \
style="margin-left:35.4pt">Error: no matching package<o:p></o:p></p> <table \
class="MsoNormalTable" border="0" cellspacing="0" cellpadding="0"> <tbody>
<tr>
<td style="padding:0cm 0cm 0cm 0cm">
<p class="MsoNormal">Thank’s for advance for your help.<o:p></o:p></p>
<p class="MsoNormal">Alain<span style="font-size:13.5pt;font-family:"Times New \
Roman",serif;color:black;mso-fareast-language:FR"> <o:p></o:p></span></p>
</td>
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style="mso-fareast-language:FR"><o:p> </o:p></span></p> <p \
class="MsoNormal"><o:p> </o:p></p> </div>
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