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List: openmrs-implementers
Subject: New CIEL dictionary added to dropbox for December 5, 2014
From: "'Andrew Kanter' via OpenMRS Implementers" <implementers () openmrs ! org>
Date: 2014-12-06 3:46:09
Message-ID: 1739765088.1374145.1417837569420.JavaMail.yahoo () jws10785 ! mail ! gq1 ! yahoo ! com
[Download RAW message or body]
Just wanted to let folks know that I am posting a new version of the CIEL concept \
dictionary in the dropbox with versions from 1.6.6 to 1.10.0 (2.1). If this is the \
first time you are hearing about the MVP/CIEL concept dictionary which now comes as a \
standard option with the 1.9.8 standalone appliance, you can get updates from the \
CIEL dropbox. You can send me an email describing your openmrs implementation, \
version number, country and project.... and I will add you to the dropbox. The 2.0 \
standalone is compatible with CIEL but does not include the entire dictionary. Be \
sure to read the wiki: \
https://wiki.openmrs.org/display/docs/Getting+and+Using+the+MVP-CIEL+Concept+Dictionary \
This version includes the global property ciel.conceptsVersion which contains the \
date of the release in YYYYMMDD format. This release has new concepts added for \
the rapid community response to the Ebola epidemic. This includes concepts to support \
Ebola treatment centre/unit workflows, burials and new experimental medications. I \
will continue to rapidly release new versions while the epidemic is continuing and \
new applications are required. I request that you let me know about any additional \
concepts needed. I also strongly recommend that people working on forms for Ebola \
standardize/normalize around CIEL concepts rather than creating unnecessary variation \
in concepts. This release also includes new content for the FACES program and the \
reference application. It also includes a separate drug table which contains all \
of the WHO essential medication list drugs linked to the concept table. This is the \
first time we are releasing a drug table along with the concept table. The plan is to \
integrate these two more closely providing concept sets of drugs which parallel the \
WHO classifications. The drug table may eventually become a superset of international \
RxNorm encoded medications from which you can select from. For now, it is just the \
WHO EML. We will keep the SQL separate for now so that you don't have to overwrite \
your local drug table when importing the CIEL concept dictionary. The drug table \
was not updated for this release, but a new 1.10.x version is available in the \
dropbox with the WHO EDL. New concepts added include:concept_id name Class Datatype \
description162760 Severity of adverse reaction Question Coded \N162759 Type of food \
or drink consumed Question Coded \N162758 Liquid food Misc N/A \N162757 Drinks \
(substance) Misc N/A Liquids that are consumed orally162756 Verbal coherence Question \
Coded \N162755 Able to speak Finding N/A Patient is able to speak coherently162754 \
Non-falciparum malaria Diagnosis N/A Malaria caused by species other than P. \
falciparum162753 Level of mobility Question Coded \N162753 Mobility Question Coded \
\N162752 Bedridden Finding N/A \N162751 Ambulates with assistance Finding N/A \
\N162751 Able to walk with assistance Finding N/A \N162750 Able to walk without \
assistance Finding N/A \N162750 Ambulates without assistance Finding N/A \N162749 \
Clinical management plan comment Question Text \N162748 Completed prescription card \
Question Coded Filling out of repeat prescription card completed.162747 Co-morbid \
conditions Finding Coded \N162747 Comorbidities Finding Coded \N162746 Target oral \
fluid intake per day (mL/24 hrs) Question Numeric \N162745 Planned infusion rate \
(ml/hr) Question Numeric \N162744 Exposure detail construct ConvSet N/A \N162743 \
Suspected Misc N/A \N162742 Time since last contact with exposure Finding Numeric \
\N162741 Patient status critical upon arrival at health facility Finding Coded \
\N162740 Funeral participant Question Coded Participated in a funeral (carried or \
touched body)162739 Type of air supply to patient Question Coded \N162738 O2 therapy \
Procedure N/A \N162738 Supplemental oxygen therapy Procedure N/A \N162737 Physical \
exam outcome Question Coded General outcome of physical exam, whether any \
abnormalities were detected.162736 Patient taking any medication Question Coded Is \
the patient taking any medication at all?162735 Room air Misc N/A \N162734 Liver size \
(cm) Finding Numeric Total liver span in centimeters162733 Lower chest wall indrawing \
Finding N/A \N162733 Subcostal recession Finding N/A \N162732 Dry ward Misc N/A \
Patient ward where patients do not have vomiting, diarrhea or other liquid exposures \
which may be less infectious162731 Wet ward Misc N/A Patient ward where patients have \
vomiting, diarrhea, etc. which may be more infectious162730 Next of kin details \
ConvSet N/A \N162729 Next of kin name (text) Question Text Free text entry to record \
name of next of kin162728 Type of patient relationship to health facility Question \
Coded \N162727 Other facility patient identifier Question Text The patient's \
identifier from another facility162727 Outside patient ID Question Text The patient's \
identifier from another facility162726 Health facility exposure detail ConvSet N/A \
Details of facility where patient had a healthcare related exposure.162725 Address \
(text) Question Text Generic field to capture an address in text form.162724 Health \
facility name Question Text Generic field to capture a health facility name162723 \
Patient visited another health facility for this illness Question Coded \N162722 \
Child at home without supervision Finding Coded Child or children (<18 years old) who \
remain at home without adult supervision162722 Children at home without supervision \
Finding Coded Child or children (<18 years old) who remain at home without adult \
supervision162721 Location where patient became ill (text) Question Text Physical \
location where patient noticed onset of symptoms.162721 Location where symptoms \
started (text) Question Text Physical location where patient noticed onset of \
symptoms.162720 Reason for patient transfer (text) Question Text \N162719 Reason \
patient not accompanied by organizational personnel Question Text \N162718 Intense \
fatigue with general weakness Symptom/Finding N/A \N162717 Financial support \
Procedure N/A \N162716 Discharge certificate Misc N/A \N162715 Hygiene packet Misc \
N/A \N162714 Solidarity packet Misc N/A Discharge packet used for building support \
with patient.162713 Mode of transport when leaving hospital Finding Coded \N162712 \
Private vehicle Misc N/A \N162711 Taxicab Misc N/A \N162711 Taxi Misc N/A \N162711 \
Cab Misc N/A \N162710 Company or organizational vehicle Misc N/A \N162709 Semi-solid \
food Misc N/A \N162708 Food intake, type Question Coded \N162708 Type of food \
consumed Question Coded \N162707 Sudden-onset of fever Symptom/Finding N/A \N162706 \
Unable to eat Finding N/A \N162705 Body removed by family Finding N/A \N162704 Reason \
for not enrolling in clinical trial or study (text) Question Text \N162703 Eligible \
for antiretroviral therapy (ART) Finding Coded \N162702 Patient underage Finding N/A \
\N162702 Patient under age Finding N/A \N162701 Reason for not enrolling in clinical \
trial or study Question Coded \N162700 Patient enrolled in clinical trial or study \
Finding Coded \N162699 Patient eligible for clinical trial or study Question Coded \
\N162699 Meets eligibility criteria for clinical trial or study Question Coded \
\N162698 Lab result defaulter Finding Coded Patient failed to return to pick up lab \
results162698 Failed to return for lab results Finding Coded Patient failed to return \
to pick up lab results162697 Eligible for clinical study Finding Coded Patient \
eligible for clinical trial or study162697 Eligible for clinical trial Finding Coded \
Patient eligible for clinical trial or study162696 Able to give consent/assent \
Finding Coded Patient is able to give consent/assent162695 Willingness to start ARVs \
Question Coded \N162695 Willing to start antiretroviral treatment Question Coded \
\N162694 Patient has a HIV WHO class III or IV illness Question Coded Evidence of an \
active WHO stage 3 or 4 illness?162694 Patient has WHO class 3 or 4 HIV illness \
Question Coded Evidence of an active WHO stage 3 or 4 illness?162693 Life threatening \
severity Misc N/A \N-------------------- Andrew S. Kanter, MD MPH FACMI
Asst. Prof. of Clinical Biomedical Informatics and Clinical Epidemiology
Columbia University
Email: andrew.kanter@dbmi.columbia.edu
Mobile: +1 (646) 469-2421
Office: +1 (212) 305-4842
Skype: akanter-ippnw
Yahoo: andy_kanter
--
OpenMRS Implementers: http://om.rs/implist
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Manage your OpenMRS subscriptions at http://om.rs/id
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[Attachment #3 (text/html)]
<html><body><div style="color:#000; background-color:#fff; font-family:HelveticaNeue, \
Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:14px"><div \
id="yiv8383804958"><div \
style="color:#000;background-color:#fff;font-family:HelveticaNeue, Helvetica Neue, \
Helvetica, Arial, Lucida Grande, sans-serif;font-size:14px;" \
id="yui_3_16_0_1_1417812221646_148987"><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115154" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655467" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655466" style="">Just wanted to let folks \
know that I am posting a new version of the CIEL concept dictionary in the dropbox \
with versions from 1.6.6 to 1.10.0 (2.1).</span></div></div><div \
class="yiv8383804958" id="yiv8383804958yui_3_13_0_1_1383242873862_115154" \
style="font-family:'Helvetica Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655465" style="margin:0in 0in \
0.0001pt;font-size:12pt;"> <span class="yiv8383804958" \
style="font-size:12pt;"> </span></div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115160" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655460" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655459" style="">If this is the first \
time you are hearing about the MVP/CIEL concept dictionary which now comes as a \
standard option with the 1.9.8 standalone appliance, you can get updates from the \
CIEL dropbox. You can send me an email describing your openmrs implementation, \
version number, country and project.... and I will add you to the dropbox. The 2.0 \
standalone is compatible with CIEL but does not include the entire \
dictionary.</span></div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115161" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655458" style="margin:0in 0in \
0.0001pt;font-size:12pt;"> </div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115167" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655457" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><b class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655456" style=""><span \
class="yiv8383804958" id="yiv8383804958yui_3_16_0_1_1412819203807_655455" style="">Be \
sure to read the wiki: <a rel="nofollow" shape="rect" class="yiv8383804958" \
target="_blank" href="https://wiki.openmrs.org/display/docs/Getting+and+Using+the+MVP-CIEL+Concept+Dictionary" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655454" \
style="color:purple;">https://wiki.openmrs.org/display/docs/Getting+and+Using+the+MVP-CIEL+Concept+Dictionary</a></span></b></div></div><div \
class="yiv8383804958" id="yiv8383804958yui_3_13_0_1_1383242873862_115168" \
style="font-family:'Helvetica Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655453" style="margin:0in 0in \
0.0001pt;font-size:12pt;"> </div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115169" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655449" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655448" style="">This version includes \
the global property ciel.conceptsVersion which contains the date of the release in \
YYYYMMDD format. </span></div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115170" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655476" style="margin:0in 0in \
0.0001pt;font-size:12pt;"> </div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115171" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655478" dir="ltr" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655477" style=""><b \
id="yiv8383804958yui_3_16_0_1_1412819203807_656184" class="yiv8383804958" \
style="">This release has new concepts added for the rapid community response to the \
Ebola epidemic. This includes concepts to support Ebola treatment centre/unit \
workflows, burials and new experimental medications. I will continue to rapidly \
release new versions while the epidemic is continuing and new applications are \
required. I request that you let me know about any additional concepts needed.<font \
color="#cd232c" class="yiv8383804958" style="" \
id="yiv8383804958yui_3_16_0_1_1417812221646_128701"> I also strongly recommend \
that people working on forms for Ebola standardize/normalize around CIEL concepts \
rather than creating unnecessary variation in concepts. </font></b></span><b \
id="yiv8383804958yui_3_16_0_1_1412819203807_656184" class="yiv8383804958" \
style="">This release also includes new content for the FACES program and the \
reference application.</b></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655478" dir="ltr" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655477" style=""><b \
id="yiv8383804958yui_3_16_0_1_1412819203807_656184" class="yiv8383804958" \
style=""> </b></span></div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115171" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655479" style="margin:0in 0in \
0.0001pt;font-size:12pt;"> </div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115171" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655482" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655481" style="">It also includes a \
separate drug table which contains all of the WHO essential medication list drugs \
linked to the concept table. This is the first time we are releasing a drug table \
along with the concept table. The plan is to integrate these two more closely \
providing concept sets of drugs which parallel the WHO classifications. The drug \
table may eventually become a superset of international RxNorm encoded medications \
from which you can select from. For now, it is just the WHO EML. We will keep the SQL \
separate for now so that you don't have to overwrite your local drug table when \
importing the CIEL concept dictionary. </span></div></div><div \
class="yiv8383804958" id="yiv8383804958yui_3_13_0_1_1383242873862_115171" \
style="font-family:'Helvetica Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655483" style="margin:0in 0in \
0.0001pt;font-size:12pt;"> </div></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_13_0_1_1383242873862_115171" style="font-family:'Helvetica \
Neue', 'Segoe UI', Helvetica, Arial, 'Lucida Grande', \
sans-serif;font-size:16px;"><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655485" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655484" style="">The drug table was not \
updated for this release, but a new 1.10.x version is available in the dropbox with \
the WHO EDL.</span></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655485" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" style=""><br \
class="yiv8383804958" style=""></span></div><div class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1412819203807_655485" dir="ltr" style="margin:0in 0in \
0.0001pt;font-size:12pt;"><span class="yiv8383804958" \
id="yiv8383804958yui_3_16_0_1_1415061112484_61835" style="">New concepts added \
include:</span></div></div><div></div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="yiv8383804958" \
style=""><div id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">concept_id<span class="" style="white-space:pre"> </span>name<span class="" \
style="white-space:pre"> </span>Class<span class="" \
style="white-space:pre"> </span>Datatype<span class="" \
style="white-space:pre"> </span>description</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162760<span class="" style="white-space:pre"> </span>Severity of adverse \
reaction<span class="" style="white-space:pre"> </span>Question<span class="" \
style="white-space:pre"> </span>Coded<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162759<span class="" style="white-space:pre"> </span>Type of food or drink \
consumed<span class="" style="white-space:pre"> </span>Question<span class="" \
style="white-space:pre" id="yui_3_16_0_1_1417812221646_149477"> </span>Coded<span \
class="" style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162758<span class="" style="white-space:pre"> </span>Liquid food<span \
class="" style="white-space:pre"> </span>Misc<span class="" \
style="white-space:pre"> </span>N/A<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162757<span class="" style="white-space:pre"> </span>Drinks (substance)<span \
class="" style="white-space:pre"> </span>Misc<span class="" \
style="white-space:pre"> </span>N/A<span class="" \
style="white-space:pre"> </span>Liquids that are consumed orally</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162756<span class="" style="white-space:pre"> </span>Verbal coherence<span \
class="" style="white-space:pre"> </span>Question<span class="" \
style="white-space:pre"> </span>Coded<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162755<span class="" style="white-space:pre"> </span>Able to speak<span \
class="" style="white-space:pre"> </span>Finding<span class="" \
style="white-space:pre"> </span>N/A<span class="" \
style="white-space:pre"> </span>Patient is able to speak coherently</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162754<span class="" style="white-space:pre"> </span>Non-falciparum \
malaria<span class="" style="white-space:pre"> </span>Diagnosis<span class="" \
style="white-space:pre"> </span>N/A<span class="" \
style="white-space:pre"> </span>Malaria caused by species other than P. \
falciparum</div><div id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" \
class="" style="">162753<span class="" style="white-space:pre"> </span>Level of \
mobility<span class="" style="white-space:pre"> </span>Question<span class="" \
style="white-space:pre"> </span>Coded<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162753<span class="" style="white-space:pre"> </span>Mobility<span class="" \
style="white-space:pre"> </span>Question<span class="" \
style="white-space:pre"> </span>Coded<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162752<span class="" style="white-space:pre"> </span>Bedridden<span class="" \
style="white-space:pre"> </span>Finding<span class="" \
style="white-space:pre"> </span>N/A<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162751<span class="" style="white-space:pre"> </span>Ambulates with \
assistance<span class="" style="white-space:pre"> </span>Finding<span class="" \
style="white-space:pre"> </span>N/A<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162751<span class="" style="white-space:pre"> </span>Able to walk with \
assistance<span class="" style="white-space:pre"> </span>Finding<span class="" \
style="white-space:pre"> </span>N/A<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162750<span class="" style="white-space:pre"> </span>Able to walk without \
assistance<span class="" style="white-space:pre"> </span>Finding<span class="" \
style="white-space:pre"> </span>N/A<span class="" \
style="white-space:pre"> </span>\N</div><div \
id="yiv8383804958yui_3_16_0_1_1417812221646_128577" dir="ltr" class="" \
style="">162750<span class="" style="white-space:pre"> </span>Ambulates without \
<p></p>
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