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List:       npaci-rocks-discussion
Subject:    [Rocks-Discuss] Re: SDSC cmake roll installation
From:       "Cooper, Trevor" <tcooper () sdsc ! edu>
Date:       2017-07-18 20:13:41
Message-ID: CAC2AD7C-6ECB-4DB0-8CE9-3601A65AE2E2 () sdsc ! edu
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Lucas,

If you added the roll to your distro and rebuilt then reinstalled a compute node you \
should not have needed to copy the test script to the node. It should have been \
auto-installed. I think you may have missed a step in adding the roll to your distro \
and rebuilding it.

You should have done the following...

# rocks add roll cmake*.iso
# rocks enable roll cmake
# cd /export/rocks/install
# rocks create distro

THEN you can reinstall a compute node and after re-install log into it and do the \
following...

[root@<your_compute_node> ~]# cd rolltests/
[root@<your_compute_node> rolltests]# ./cmake.t
ok 1 - cmake installed
ok 2 - cmake-generated build
ok 3 - cmake module installed
ok 4 - cmake version module installed
ok 5 - cmake version module link created
1..5

As far as the Intel roll build goes please RE-READ the Requirements section of the \
README.md file for that repository and look closely at the layout of the directories \
for the intel-roll.

We do not currently have the 2017 compiler integrated into the roll so you are \
forging a new path.

I'm thinking you need to replicate a similar configuration to the the \
src/intel-compilers-2015 directory for the 2017 version of the libraries. Intel \
changed from providing separate tgz's in the 2013 version to a single tgz in the 2015 \
version and it appears this is similar for libraries.

I'm cc'ing the folks in our group who have more experience building the Intel roll to \
add input here.

Trevor

> On Jul 18, 2017, at 10:22 AM, Lucas Mól <lucasmol@yahoo.com> wrote:
> 
> Dear Trevor,
> Thank you very much. It seems that it is working now. After reinstalling a compute \
> node I copied the test script to the compute node and run it. I got the following \
> result:[root@compute-0-2 ~]# ./cmake.t  not ok 1 - cmake installed
> #   Failed test 'cmake installed'
> #   at ./cmake.t line 49.
> ok 2 # skip cmake not installed
> ok 3 # skip cmake not installed
> ok 4 # skip cmake not installed
> ok 5 # skip cmake not installed
> 1..5
> # Looks like you failed 1 test of 5.
> 
> Is this expected? It seems ok for me.
> Other issue that I'm facing is in the installation of the intel-roll libraries. \
> I've copied the libraries tgz files to src/intel-libraries/ and modified the \
> version.mk file to reflect the downloaded version. However, while trying to build \
> iso image it stuck trying to download tgz files as follows: ### build ###
> 
> 
> + BUILDROOT=/root/sdsc-rolls/intel-roll/src/intel-libraries/sdsc-intel-libraries.buildroot
>  + make -f /root/sdsc-rolls/intel-roll/src/intel-libraries/sdsc-intel-libraries.spec.mk \
> build make[3]: Entering directory \
> `/root/sdsc-rolls/intel-roll/BUILD/sdsc-intel-libraries-2017.3.196' make \
> ROOT=/root/sdsc-rolls/intel-roll/src/intel-libraries/sdsc-intel-libraries.buildroot \
> build make[4]: Entering directory \
> `/root/sdsc-rolls/intel-roll/BUILD/sdsc-intel-libraries-2017.3.196' ::: Downloading \
> http://forge.sdsc.edu/triton/intel/src/intel-libraries/l_ipp_2017.3.196.tar.gz ::: \
> % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current Dload \
> Upload   Total   Spent    Left  Speed 0     0    0     0    0     0      0      0 \
>                 --:--:--  0:00:01 --:--:--     0
> curl: (22) The requested URL returned error: 403 Forbidden
> > > > Verifying size of l_ipp_2017.3.196.tar.gz :::
> /usr/bin/stat: cannot stat `l_ipp_2017.3.196.tar.gz': No such file or directory
> 
> What am I missing here?
> Thank you
> LucasOn Sunday, July 16, 2017, 3:23:06 AM GMT-3, Cooper, Trevor <tcooper@sdsc.edu> \
> wrote: 
> Lucas,
> 
> I had a quick look at the source for the cmake roll and see that in that roll (as \
> well as others) we have made a change[1] that isn't documented in the README file \
> that should be. 
> We have modified many application rolls in the SDSC Application stack so that they \
> only install on compute and login nodes. Since we don't use these application on \
> the frontend or other custom appliances we create we no longer add them to all \
> clients and/or all nodes. 
> To see what what would be installed on a compute or login node you can run the \
> rocks run command like this... 
> rocks run roll cmake host=<compute_node_name> > rrr.cmake.compute
> 
> or 
> 
> rocks run roll cmake host=<login_node_name> > rrr.cmake.login
> 
> Then look at the contents of the file you created.
> 
> If you want to add these RPMs to other nodes you simply execute the results of the \
> above commands on those nodes (you should verify the contents first). 
> Most application rolls will only install RPMs but some will add configuration as \
> well and it's good to know what that is before putting it on your nodes. 
> I'll talk to the application roll team and we'll look at adding appropriate \
> documentation to the README files to explain this change. 
> -- Trevor
> 
> [1] - https://github.com/sdsc/cmake-roll/commit/83b66cabe6efef38f35a4a4b159c526d5c382a46
>  
> > On Jul 14, 2017, at 6:30 PM, Lucas Mól <lucasmol@yahoo.com> wrote:
> > 
> > After I fixed the command I could build the iso image. However, after adding it \
> > to the rocks distribution the rocks run roll cmake | bash command give the \
> > following output: 
> > Cleaning repos: Rocks-6.2
> > Cleaning up Everything
> > It seems that it was not installed at all, since the testing script \
> > /root/rolltests/cmake.t was not created. Exactly the same issue happened with the \
> > gnutools roll. How could I check environment variables cited by Gonzalo Arroyo? \
> > May this be the problem? Regards,
> > Lucas
> > 
> > 
> > On Friday, July 14, 2017, 9:27:47 AM GMT-3, Ing. Gonzalo E. Arroyo \
> > <garroyo@ifimar-conicet.gob.ar> wrote: 
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