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List:       centos
Subject:    Re: [CentOS] R: dplyr, doBy, and ggplot2 in CentOS7
From:       Larry Martell <larry.martell () gmail ! com>
Date:       2017-10-30 20:45:38
Message-ID: CACwCsY4PpppUOjtk_z270qVOrhcOyK7q78k+AWA46F7BuXkhGQ () mail ! gmail ! com
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On Mon, Oct 30, 2017 at 4:03 PM, Jason Edgecombe <jwedgeco@uncc.edu> wrote:
> You can install any R packages from CRAN using the "install.packages()"
> command form within R itself. This will download, compile, and install the
> packages into your personal user account. you might need to install some
> supporting *-devel RPM packages via "yum", but otherwise, it should work.

Yes, but as I said I am running R from python with rpy2.

> On Mon, Oct 30, 2017 at 11:05 AM, Larry Martell <larry.martell@gmail.com>
> wrote:
>
>> On Mon, Oct 30, 2017 at 10:56 AM Tony Schreiner <anthony.schreiner@bc.edu>
>> wrote:
>>
>> > On Mon, Oct 30, 2017 at 10:27 AM, Larry Martell <larry.martell@gmail.com
>> >
>> > wrote:
>> >
>> > > I have a R script that I am running from python with rpy2. On a debian
>> > > system I run this:
>> > >
>> > > apt-get install R-cran-ggplot2 R-cran-caret
>> > >
>> > > And the script works. I want to move this to CentOS 7 system. There it
>> > > cannot find R-cran-ggplot2 or R-cran-caret. Does anyone know what
>> > > packages in CentOS 7 I need for dplyr, doBy, and ggplot2?
>> > >
>> >
>> >
>> > They are not in the CentOS or epel distros. I have built both dplyr and
>> > ggplot2 for CentOS 6 and 7, using the spec file crated by R2spec (from
>> > epell) and rpmbuild. They both require building several other R packages,
>> > and a bit of tweaking to the %files portion of the spec file, but are
>> > doable. I've never tried doBy or caret.
>> > Feel free to contact me directly for more information,
>>
>>
>> Thanks for the reply. At least this will keep me from searching for them.
>> Perhaps I will stick with debian.
>>
>> >
>> >
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