[prev in list] [next in list] [prev in thread] [next in thread] 

List:       bioc-devel
Subject:    Re: [Bioc-devel] CuvierLab -Request to add maintainers for HicAggR
From:       Olivier Cuvier <olivier.cuvier () univ-tlse3 ! fr>
Date:       2024-03-28 11:28:35
Message-ID: 2075793144.16281998.1711625315115.JavaMail.zimbra () univ-tlse3 ! fr
[Download RAW message or body]

Dear Lori Sheperd - Kern =


Awesome, thank you very much. =


Have a great day :) =

Oliver =



De: "Kern, Lori" <Lori.Shepherd@RoswellPark.org> =

=C3=80: "Olivier Cuvier" <olivier.cuvier@univ-tlse3.fr>, "bioc-devel" <bioc=
-devel@r-project.org> =

Envoy=C3=A9: Jeudi 28 Mars 2024 12:19:38 =

Objet: Re: CuvierLab -Request to add maintainers for HicAggR =


I can assist with this and will be in touch with Dr. Tesfaye to set up a Bi=
ocCredentials account. =





Lori Shepherd - Kern =


Bioconductor Core Team =


Roswell Park Comprehensive Cancer Center =


Department of Biostatistics & Bioinformatics =


Elm & Carlton Streets =


Buffalo, New York 14263 =


From: Bioc-devel <bioc-devel-bounces@r-project.org> on behalf of Olivier Cu=
vier <olivier.cuvier@univ-tlse3.fr> =

Sent: Wednesday, March 27, 2024 6:29 PM =

To: bioc-devel@r-project.org <bioc-devel@r-project.org> =

Subject: [Bioc-devel] CuvierLab -Request to add maintainers for HicAggR =

Dear Colleagues =


I'd like to add Dr. Tesfaye - rob.tesf@gmail.com - as a maintainer of Cuvie=
rLab HicAggR GitHub-Bioconductor package. =


Thank you for your help =

Best regards =

Oliver =

************************************ =

Olivier Oliver Cuvier - =

Group Leader (Director of Med Research (DR) / Inserm) =

Laboratory of Chromatin Dynamics - Functional Genomics =

Unit of Molecular Cellular and Dev. Biology (MCD) =

Center of Biology Integrative (CBI) / CNRS-Toulouse =

+33-659 75 42 70 =

olivier.cuvier@inserm.fr =

olivier.cuvier@univ-tlse3.fr =

olivier.cuvier@gmail.com =

************************************************************************ =



----- Mail original ----- =

De: "Robel Tesfaye" <robel.tesfaye@univ-tlse3.fr> =

=C3=80: "Olivier Cuvier" <olivier.cuvier@univ-tlse3.fr> =

Envoy=C3=A9: Mercredi 27 Mars 2024 19:10:08 =

Objet: Re: HicAggR: demo on PlotAPA_byDistance and compare_to_background fu=
nctions =


Salut Olivier, =


Peux-tu t'occuper de =C3=A7a rapidement s'il te pla=C3=AEt? Le reviewing es=
t en =

attente tant que je ne leur push pas la nouvelle version sur le git bioc =


On 26/03/2024 19:27, Robel Tesfaye wrote: =

> =

> Salut Olivier, =

> =

> Il n'y a que ton (olivier.cuvier@univ-tlse3.fr) compte qui peut mettre =

> =C3=A0 jour la version du package pr=C3=A9sent sur le git de bioconductor=
. =

> =

> Donc afin d'ajouter une liste de gens qui sont maintainers, tu dois =

> confirmer qu'on a droit de push des changements au git bioconductor. =

> =

> Si tu veux plus de d=C3=A9tails sur mes =C3=A9changes avec bioc =

> =

> [ https://secure-web.cisco.com/1Zegt_Gn2IBgqTP0oVVXaW-DevkpyjF3ysopH2xJUw=
v37_qzuLYswgriq8Nc59u268Y5WTBWX97BGNreUt_-gGpevznmdMWLcBsjwYaI7Sif52zsGAsTa=
Yv2fQFhwmgff13Cl17cl-oRT5O0f_VKLdrrWbHHQxMYoE9o1zic2BMwGaXsjo5DVUVgF4H7A8rV=
muoiEKOFL1FQrM26fHeMOfTcstCW1Z5a1uRVCUhLXDmgGTudC5BmKfYANy6T6uFBEaOQKdf6BUx=
ONpCwijkr09QtQBuWHDYAC_qX3EO__aMwEbWEgDbUAqSkWh7OFpPby/https%3A%2F%2Fgithub=
.com%2FBioconductor%2FContributions%2Fissues%2F2869 | =

https://secure-web.cisco.com/1Zegt_Gn2IBgqTP0oVVXaW-DevkpyjF3ysopH2xJUwv37_=
qzuLYswgriq8Nc59u268Y5WTBWX97BGNreUt_-gGpevznmdMWLcBsjwYaI7Sif52zsGAsTaYv2f=
QFhwmgff13Cl17cl-oRT5O0f_VKLdrrWbHHQxMYoE9o1zic2BMwGaXsjo5DVUVgF4H7A8rVmuoi=
EKOFL1FQrM26fHeMOfTcstCW1Z5a1uRVCUhLXDmgGTudC5BmKfYANy6T6uFBEaOQKdf6BUxONpC=
wijkr09QtQBuWHDYAC_qX3EO__aMwEbWEgDbUAqSkWh7OFpPby/https%3A%2F%2Fgithub.com=
%2FBioconductor%2FContributions%2Fissues%2F2869 ] =

> =

> Comme tu n'as pas de compte personnel github (car CuvierLab est =

> d=C3=A9sormais un compte organization), tu devrais soit cr=C3=A9er un com=
pte =

> github avec ce mail =

> =

> ou envoyer un mail =C3=A0 bioc-devel@r-project.org en mettant mon adresse
> mail (rob.tesf@gmail.com) et ceux que tu veux ajouter en cc dans le mail.
> =

> Avec en en-t=C3=AAte par exemple: Request to add maintainers for HicAggR
> =

> merci, =

> =

> On 19/03/2024 10:50, Robel Tesfaye wrote: =

>> c'est cool merci. =

>> =

>> J'ai pens=C3=A9 aux variants justement pour dire que nos associations so=
nt =

>> "bonnes". =

>> =

>> Il y a ce site [ https://secure-web.cisco.com/1G6fXBGvL5jOh1VtO00ca_nTjM=
DoDVfp5HtpJWYdNmFYE_HPqG4xrG_NWB_8piaaHxEUxL2oI9lQ8vveqwSscOE3LpGwqeaS-t_yW=
8YIsu7pzJLa8SQ68gZMSJnplL_yJdn0jZf3m78AbxpkOxHtb9NRG23dzaiC784Qy3ahO2egIuig=
fSyqza0blDVNSp2kfK_v6EHYuxEQp0UdlQHWsfSDDLBdqgNXrlhR4JFJ7NiCKpWb9ZKaCsbNh2T=
4q6YJHCZB-42uqC5CyPkBMcnWk31l7n1EO12XTXHSsa-KaATgElJJePw1Y-NwWuIhXNQuB/http=
s%3A%2F%2Fwww.gtexportal.org%2Fhome%2Fgene%2FZBTB16 | =

https://secure-web.cisco.com/1G6fXBGvL5jOh1VtO00ca_nTjMDoDVfp5HtpJWYdNmFYE_=
HPqG4xrG_NWB_8piaaHxEUxL2oI9lQ8vveqwSscOE3LpGwqeaS-t_yW8YIsu7pzJLa8SQ68gZMS=
JnplL_yJdn0jZf3m78AbxpkOxHtb9NRG23dzaiC784Qy3ahO2egIuigfSyqza0blDVNSp2kfK_v=
6EHYuxEQp0UdlQHWsfSDDLBdqgNXrlhR4JFJ7NiCKpWb9ZKaCsbNh2T4q6YJHCZB-42uqC5CyPk=
BMcnWk31l7n1EO12XTXHSsa-KaATgElJJePw1Y-NwWuIhXNQuB/https%3A%2F%2Fwww.gtexpo=
rtal.org%2Fhome%2Fgene%2FZBTB16 ] dans le =

>> quel sont r=C3=A9pertori=C3=A9s les eQTL de g=C3=A8nes d'int=C3=A9r=C3=
=AAt. =

>> =

>> On aura peut-=C3=AAtre pas les variants pour chacun de nos enhancers mai=
s =

>> on peut confirmer certaines des associations je pense. =

>> =

>> On 19/03/2024 07:44, Olivier Cuvier wrote: =

>>> Un article =C3=A0 consid=C3=A9rer peut-etre... =

>>> =

>>> =

>>> ----- Mail original ----- =

>>> De: "Olivier Cuvier" <olivier.cuvier@univ-tlse3.fr> =

>>> =C3=80: "Robel Tesfaye" <robel.tesfaye@univ-tlse3.fr> =

>>> Cc: "stephane schaak" <stephane.schaak@inserm.fr>, "Naomi SCHICKELE" =

>>> <naomi.schickele@univ-tlse3.fr> =

>>> Envoy=C3=A9: Lundi 18 Mars 2024 19:11:16 =

>>> Objet: Re: HicAggR: demo on PlotAPA_byDistance and =

>>> compare_to_background functions =

>>> =

>>> Salut Robel, St=C3=A9phane, Naomi =

>>> =

>>> =

>>> Merci pour les Figures. Je regarde tout ca. Je ne sais pas sir j'ai =

>>> d=C3=A9j=C3=A0 dit que j'=C3=A9tais en meeting =C3=A0 Lyon aujourd'hui =
et demain. Peu =

>>> importe, c'est cool que tu aies pu regarder les figures de ton cot=C3=
=A9. =

>>> On peut en discuter mercredi apr=C3=A8m si tu veux bien, ou vendredi. =

>>> Disons que dans les perspectives du papier, il est important pour =

>>> mon =C3=A9quipe de garder la trame scientifique que nous avions fix=C3=
=A9, =

>>> avec un max de jolis r=C3=A9sultats qui sont appuy=C3=A9s par un bon =

>>> positionnement de l'=C3=A9quipe dans la th=C3=A9matique. Bref, on en di=
scutera. =

>>> =

>>> Bonne fin de journ=C3=A9e =C3=A0 vous 3 =

>>> olivier =

>>> =

>>> ----- Mail original ----- =

>>> De: "Robel Tesfaye" <robel.tesfaye@univ-tlse3.fr> =

>>> =C3=80: "Olivier Cuvier" <olivier.cuvier@univ-tlse3.fr>, "stephane =

>>> schaak" <stephane.schaak@inserm.fr>, "Naomi SCHICKELE" =

>>> <naomi.schickele@univ-tlse3.fr> =

>>> Envoy=C3=A9: Lundi 18 Mars 2024 19:03:17 =

>>> Objet: HicAggR: demo on PlotAPA_byDistance and compare_to_background =

>>> functions =

>>> =

>>> les figures que je vous parlais vendredi. =

>>> =

> -- =

> Robel Tesfaye =

> Postdoc =

> Team Chromatin Dynamics and Cell Proliferation =

> UMR5077 CNRS-UPS, CBI =

> 169 rue Marianne Grunberg-Manago =

> 31400 Toulouse =


-- =

Robel Tesfaye =

Postdoc =

Team Chromatin Dynamics and Cell Proliferation =

UMR5077 CNRS-UPS, CBI =

169 rue Marianne Grunberg-Manago =

31400 Toulouse =


_______________________________________________ =

Bioc-devel@r-project.org mailing list =

[ https://secure-web.cisco.com/1AYinIwvuGwGBfW700utMMC5_arfKdtGZ_yEDLH7--9_=
aB8uTY8ewzKXP9k4vDMgX1yuS6NWuHmivV0s6_O5f46GP5HHDHV41K9H96byvBE-lgNkG8BSJH0=
a4b33Zt2nEKM7sn0E48RxS2Kth_UANZdE3H2yA76pCbqYbn9Epeee07uaUebfYDaO9p9l_TdFsR=
wkibj7v4y0OOxcIl6tcNWQx24PMCRKqbTXDDyCmCs3ZBPQcBFDLml_wQnpaV9drwM2qbtIc2UmK=
ItdSpAs9MAPCL9ZihzcNZEDdaK2QHYq9zX7SQT_zKkOvS8fLzB5Y/https%3A%2F%2Fstat.eth=
z.ch%2Fmailman%2Flistinfo%2Fbioc-devel | https://secure-web.cisco.com/1AYin=
IwvuGwGBfW700utMMC5_arfKdtGZ_yEDLH7--9_aB8uTY8ewzKXP9k4vDMgX1yuS6NWuHmivV0s=
6_O5f46GP5HHDHV41K9H96byvBE-lgNkG8BSJH0a4b33Zt2nEKM7sn0E48RxS2Kth_UANZdE3H2=
yA76pCbqYbn9Epeee07uaUebfYDaO9p9l_TdFsRwkibj7v4y0OOxcIl6tcNWQx24PMCRKqbTXDD=
yCmCs3ZBPQcBFDLml_wQnpaV9drwM2qbtIc2UmKItdSpAs9MAPCL9ZihzcNZEDdaK2QHYq9zX7S=
QT_zKkOvS8fLzB5Y/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-dev=
el ] =



This email message may contain legally privileged and/or confidential infor=
mation. If you are not the intended recipient(s), or the employee or agent =
responsible for the delivery of this message to the intended recipient(s), =
you are hereby notified that any disclosure, copying, distribution, or use =
of this email message is prohibited. If you have received this message in e=
rror, please notify the sender immediately by e-mail and delete this email =
message from your computer. Thank you. =


	[[alternative HTML version deleted]]

_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
[prev in list] [next in list] [prev in thread] [next in thread]