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List:       bioc-devel
Subject:    Re: [Bioc-devel]  New maintainer for package - Updating a R package and
From:       "Kern, Lori" <Lori.Shepherd () RoswellPark ! org>
Date:       2022-09-30 11:41:04
Message-ID: BL1PR12MB53013C2244DF98965C4BE887F9569 () BL1PR12MB5301 ! namprd12 ! prod ! outlook ! com
[Download RAW message or body]

I will create your git credentials account and send you the temporary password in a \
private email.  Please do as Herve says by altering the DESCRIPTION and pushing to \
git.bioconductor.org.

You will be responsible for pushing the changes to git.bioconductor.org.  You can \
find many details at https://contributions.bioconductor.org/git-version-control.html

Most immediately helpful will probably be the following for assistance setting up \
remotes: https://contributions.bioconductor.org/git-version-control.html#new-package-workflow


Cheers,


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Hervé Pagès <hpages.on.github@gmail.com>
Sent: Thursday, September 29, 2022 5:58 PM
To: Tulip Nandu <Tulip.Nandu@UTSouthwestern.edu>; Kern, Lori \
                <Lori.Shepherd@RoswellPark.org>; bioc-devel@r-project.org \
                <bioc-devel@r-project.org>
Subject: Re: [Bioc-devel] New maintainer for package - Updating a R package and \
pushing the commit

Hi Tulip,

On 29/09/2022 13:52, Tulip Nandu wrote:

> Hi Kern,
> 
> Anusha no longer is associated with the lab. So I will need to have access to the \
> package. If you can create an account on GitCredentials that would be great.

If that means Anusha is no longer going to maintain the package, then
their role in Authors@R would need to be switched from "cre" to "aut" or
"ctb" or whatever is appropriate.

As Lori said, the Maintainer and Author fields should get removed, and
your name and role moved to the Authors@R field.

Thanks,

H.

> 
> I do have a github account.  tulipnandu is the username.
> 
> 
> https://secure-web.cisco.com/1sz7apuCmn4ohmCI87ibLXfXf2HV76G22UDgL3c3S3mC74LaBD59xyH \
> INjjvQZLobFGBIwBE7uBbAQG37cd6fpIfYTT-kESDUcqUjRDfAHF4aUfYld15UCItSNFsgmKPXcaM9JTp9DM \
> piG1yWqineSY-XvOvciOmBslTzPrQTjSmnCjcV9Bjig7kPR2UV6bOQ-kee1qnpXXfQRK3WAmpK6A6mAuodm_ \
> ae5UfmtS7Obzwxs5SApgpFc0DjM8uCcxyJVpmOWhu7UiHYQdlS9h2j92Jx6qgxDDca79fUi7LcRE1zCLWjNjx7geIuxylxLuBK/https%3A%2F%2Fgithub.com%2Ftulipnandu
>  [https://secure-web.cisco.com/1WFyb-uH1KKqS_8qxzHe822g-zoOK-K98o8CvfWtriy_VQsnIhXz5 \
> TmS-XLutbI4QuJJlr-jDUjeUwXnK_B05kL99Byvz6rZkxnMoOCNuc4beIgaVCv5o9pancBV5rRnZzP0EByH5 \
> mcEREDgmAsTRnHU7-cT7OVhSx-_GAPy6VsSjw7mI37X1_FHLlhC0j_3wJrruV-sbUAm00rPfcPt2UzLUjVUK \
> aw-WnB7sS5X7B2D3TaS5K4tYfFi8QZ5khtk6JMvRZNoMMNGU8J5lV38h6T1HFnAA12zDhGTJ_UoiRSff1ndx \
> BOKjZJVJzSb7oNYl/https%3A%2F%2Favatars.githubusercontent.com%2Fu%2F1099843%3Fv%3D4%3 \
> Fs%3D400<https://secure-web.cisco.com/1sz7apuCmn4ohmCI87ibLXfXf2HV76G22UDgL3c3S3mC74 \
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> A6mAuodm_ae5UfmtS7Obzwxs5SApgpFc0DjM8uCcxyJVpmOWhu7UiHYQdlS9h2j92Jx6qgxDDca79fUi7LcRE1zCLWjNjx7geIuxylxLuBK/https%3A%2F%2Fgithub.com%2Ftulipnandu>
>  tulipnandu - Overview<https://secure-web.cisco.com/1sz7apuCmn4ohmCI87ibLXfXf2HV76G2 \
> 2UDgL3c3S3mC74LaBD59xyHINjjvQZLobFGBIwBE7uBbAQG37cd6fpIfYTT-kESDUcqUjRDfAHF4aUfYld15 \
> UCItSNFsgmKPXcaM9JTp9DMpiG1yWqineSY-XvOvciOmBslTzPrQTjSmnCjcV9Bjig7kPR2UV6bOQ-kee1qn \
> pXXfQRK3WAmpK6A6mAuodm_ae5UfmtS7Obzwxs5SApgpFc0DjM8uCcxyJVpmOWhu7UiHYQdlS9h2j92Jx6qgxDDca79fUi7LcRE1zCLWjNjx7geIuxylxLuBK/https%3A%2F%2Fgithub.com%2Ftulipnandu>
>  tulipnandu has 10 repositories available. Follow their code on GitHub.
> github.com
> Also I would need to push the changes in the src file to master on \
> bioconductor/git. If I can get some help with that, it would be great too. 
> Regards,
> 
> Tulip.
> 
> ________________________________
> From: Kern, Lori <Lori.Shepherd@RoswellPark.org>
> Sent: Thursday, September 29, 2022 6:52 AM
> To: Tulip Nandu <Tulip.Nandu@UTSouthwestern.edu>; bioc-devel@r-project.org \
>                 <bioc-devel@r-project.org>; Anusha Nagari \
>                 <Anusha.Nagari@UTSouthwestern.edu>
> Subject: Re: New maintainer for package - Updating a R package and pushing the \
> commit 
> 
> EXTERNAL MAIL
> 
> This message was sent securely using \
> Zix�<http://secure-web.cisco.com/1u21LTpbZnpvMlJpYSUJfpcqlUIF9iZZ-XXgvnG9T6wz2HtFz \
> fnPIaY65TC4DlxRu8hrNeUctPgOq5apCZC6W9L9nrnQCU4M9fxtv6CsKzIlYbjasmWlPkHy-kSPDrBBSCGb- \
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>  
> a few points:
> 
> Normally only one person has maintainer access to a package this currently was \
> Anusha Nagari <anusha.nagari@utsouthwestern.edu>.  Should they also retain \
> maintainer access? 
> Anusha was assigned because that is who is listed with Authors@R.  You currently \
> have a mixure of using Authors@R and Maintainer/Author field.  Please remove \
> Author/Maintainer fields and only use Authors@R. 
> In a normal procedure the currently listed maintainer would request the switch or \
> additional access.  Since I see you listed in the Maintainer field, we can ignore \
> this step for this situation. I will need to create an account on our \
> GitCredentials where you can manage your ssh keys for access.  We can link a github \
> account for access.  Do you have a personal github account you would like \
> associated with; if so please provide your github username? 
> Cheers,
> 
> 
> Lori Shepherd - Kern
> 
> Bioconductor Core Team
> 
> Roswell Park Comprehensive Cancer Center
> 
> Department of Biostatistics & Bioinformatics
> 
> Elm & Carlton Streets
> 
> Buffalo, New York 14263
> 
> ________________________________
> From: Bioc-devel <bioc-devel-bounces@r-project.org> on behalf of Tulip Nandu \
>                 <Tulip.Nandu@UTSouthwestern.edu>
> Sent: Wednesday, September 28, 2022 5:15 PM
> To: bioc-devel@r-project.org <bioc-devel@r-project.org>
> Subject: [Bioc-devel] New maintainer for package - Updating a R package and pushing \
> the commit 
> Hi,
> 
> I'm the new maintainer of the groHMM package which is having issues in its build.
> 
> In that view I would like to update the package but it won't allow me since my \
> email is not on file with the maintainer of bioconductor package. 
> Can you please list the steps to have me listed as a maintainer and update the \
> package on bioconductor/git. 
> Let me know.
> 
> Regards,
> 
> Tulip.
> 
> 
> ________________________________
> 
> UT Southwestern
> 
> Medical Center
> 
> The future of medicine, today.
> 
> [[alternative HTML version deleted]]
> 
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--
Hervé Pagès

Bioconductor Core Team
hpages.on.github@gmail.com




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