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List:       bioc-devel
Subject:    Re: [Bioc-devel] Large data frames in inst/extdata
From:       Vincent Carey <stvjc () channing ! harvard ! edu>
Date:       2021-08-04 19:42:39
Message-ID: CAANT7+U+fNyJWDBqyt5UhtDCjz=sLy3X-_8zfqVyQcGCshkF0Q () mail ! gmail ! com
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If the data frames are outcomes of experiments (wet lab or computational)
use ExperimentHub

If annotation, use AnnotationHub

Submission instructions for these Hub contributions are available at, e.g.,
https://bioconductor.org/packages/release/bioc/vignettes/ExperimentHubData/inst/doc/ExperimentHubData.html



On Wed, Aug 4, 2021 at 3:32 PM Kelsey Chetnik via Bioc-devel <
bioc-devel@r-project.org> wrote:

> I have a package I would like to submit to Bioconductor. Some functions of
> the package utilize precalculated data frames currently stored in the
> inst/extdata directory. These data frames result in the source package
> exceeding 5 MB (~25 MB).
> 
> Are there any best practices or recommendations for storing data frames
> that are required for certain functions?
> 
> Thanks,
> Kelsey
> 
> [[alternative HTML version deleted]]
> 
> _______________________________________________
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
> 

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