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List:       bioc-devel
Subject:    Re: [Bioc-devel] What should I do if I need to ask my package to be deprecated?
From:       "Kern, Lori" <Lori.Shepherd () RoswellPark ! org>
Date:       2021-02-25 22:16:38
Message-ID: MN2PR12MB4094F1EC90A114C832703DCFF99E9 () MN2PR12MB4094 ! namprd12 ! prod ! outlook ! com
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Thank you for letting us know. I will begin the deprecation process for the package.

Cheers

Get Outlook for iOS<https://aka.ms/o0ukef>
________________________________
From: Bioc-devel <bioc-devel-bounces@r-project.org> on behalf of Kozo Nishida \
                <kozo.nishida@gmail.com>
Sent: Thursday, February 25, 2021 5:00:18 PM
To: bioc-devel@r-project.org <bioc-devel@r-project.org>
Subject: [Bioc-devel] What should I do if I need to ask my package to be deprecated?

Hello,

Can I ask my package MSEADbi to be deprecated?
https://secure-web.cisco.com/1k5L1s41pbEp75fIRd4yxYx_PXFvf0mnOmvT3o9wrlyM2u5K44MTwvZGR \
0ecC7aq0qlIhu2AOJZyW4xgaE8jQnyQFkVh_kJsvSxYvel4QuHY523awMKvXW6CCCo8nBb9fq_MYZlzjRlk6SK \
92nT_HB7FjV8XW_dhTSBVr-DMOa09kbkuF8-DpnsC98vX0m3ayjN9RQE7996hI5PD4Bvx8IhqzOL3N269jq5Bp \
1Z1IeaiFrRsAfaMnEMJLHkG1be7quWjcFCY6al6VYsPY5nqvK3M7QezQVHaf1Mpvj-ynzXbmjBGXLApvVDT9y1 \
SZ84Wa/https%3A%2F%2Fbioconductor.org%2Fpackages%2Frelease%2Fbioc%2Fhtml%2FMSEADbi.html


I have developed an alternative (AnnotationHub) package to MSEADbi
(called AHPathbankDbs
https://secure-web.cisco.com/1ZVXn-bPXajcvw-mLAqfJ-0ANAP2YqH2SByLRfbYC_R26MiFH9X5qZZOd \
IQEiTD8NgdStmAZI-b4r1H4hikpzJ3LOdqJzn1VzLplVuSh7aytveMf3wqkrPHO4_ADXEQRk477wrwYopoaagB \
JRvBS-E2t89EEW5vUKL17VPRY8lIwjOQunZ0X9N7v1pmSyT0iLovKRbFWH8mYTJ1z8X0vbV97D5dMFYwYxw61J \
-fYMBaiFjBz8is-OrnN78jO202GmKTer1Bls-Ee_DTf9ICQlVFEL6qsXEgiMeoK0AdVl4JUvX9ao7tnkuh5oTT8ZuBZ8/https%3A%2F%2Fgithub.com%2FBioconductor%2FContributions%2Fissues%2F1825 \
) So the MSEADbi package will not be maintained.

MSEADbi is not AnnotationHub package and the implementation style
is not up to date.
I was unaware of the existence of the AnnotationHub package
when I developed MSEADbi.

What kind of procedure should I take in such a case?


Thanks,
Kozo Nishida

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https://secure-web.cisco.com/1MVEj7ecvVIN7LSBBcKQ9Qan9XkOy4-14NEAP_JD_Fx6A-fwTkmqiWtYm \
reTNIzD9CjhacZjXAqz90SHDdslJl4eoQfVUwEa2X_UCH4NZxPoGW2H4xtJCSyirWuU_vuci2fdYHykiGU4Oez \
p-Y_DNqSCr_PoWtVJ7xB3fieSxvMJ025fEEap2gBe9CdiKc5kFs9PF6HBbneDQlKJOhrXvIPZB5CqTGFHNNOvw \
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