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List:       bioc-devel
Subject:    Re: [Bioc-devel] Updating R-devel on Bioconductor builders
From:       "Shepherd, Lori" <Lori.Shepherd () RoswellPark ! org>
Date:       2020-01-29 13:04:06
Message-ID: MN2PR12MB407729A1827ED7BA6754B2A7F9050 () MN2PR12MB4077 ! namprd12 ! prod ! outlook ! com
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Many reported an issue with the vignettes building when using BiocStyle
https://github.com/Bioconductor/BiocStyle/issues/71
We traced it back to an issue with knitr.
https://github.com/yihui/knitr/issues/1797

While knitr fixed the issue,  it has not been pushed officially to CRAN as of yet so \
this ERROR will mostly likely reappear in today's devel 3.11 build report after \
R-devel was updated yesterday. We are making corrections today to install the latest \
version so these ERROR's should clear up on their own in tomorrow's report.  Sorry \
for the inconvenience.


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces@r-project.org> on behalf of Shepherd, Lori \
                <Lori.Shepherd@RoswellPark.org>
Sent: Tuesday, January 28, 2020 12:34 PM
To: bioc-devel@r-project.org <bioc-devel@r-project.org>
Subject: [Bioc-devel] Updating R-devel on Bioconductor builders

We will be updating R-devel on the Bioconductor devel builders this afternoon \
(malbec2 and tokay2).  This may mean some intermittent download on the Single Package \
Builder.  It should not affect the build report for today. We appreciate your \
understanding.


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263


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