[prev in list] [next in list] [prev in thread] [next in thread] 

List:       bioc-devel
Subject:    Re: [Bioc-devel] Regarding a discrepancy in test_that speed between Windows and Linux
From:       "Shepherd, Lori" <Lori.Shepherd () RoswellPark ! org>
Date:       2019-01-24 19:21:19
Message-ID: BL0PR12MB235404B7C6B2AA5EEBE6FA46F99A0 () BL0PR12MB2354 ! namprd12 ! prod ! outlook ! com
[Download RAW message or body]

For consistency, the discussion has been moved to the submission.  Please see

https://github.com/Bioconductor/Contributions/issues/972#issuecomment-456839247



To follow the discussion if interested.


Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces@r-project.org> on behalf of Jakob Theorell \
                <jakob.theorell@ndcn.ox.ac.uk>
Sent: Monday, January 21, 2019 4:31:32 PM
To: bioc-devel@r-project.org
Subject: [Bioc-devel] Regarding a discrepancy in test_that speed between Windows and \
Linux

Dear Bioconductor developers,
I am currently in the review-phase for our package DepecheR (first time). As neither \
me or the other developer use Windows, we have not run the tests on any Windows \
operative system before. Now when we do on the automatic single-package builder, it \
turns out that the tests take approximately three times as long time to run on \
Windows compared to Ubuntu or Darwin. This means that we get a run-time warning for \
Windows, which is the final warning that we get. Now, I simply wonder: is this a \
familiar issue and if so, is there a reasonable simple workaround? It might be worth \
mentioning that we use quite a lot of foreach-based parallel processing in the \
package.

Very thankful for any input!

Best regards

Jakob Theorell, MD/PhD
Autoimmune Neurology Group
Nuffield Department of Clinical Neurosciences
University of Oxford




        [[alternative HTML version deleted]]

_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel


This email message may contain legally privileged and/or confidential information.  \
If you are not the intended recipient(s), or the employee or agent responsible for \
the delivery of this message to the intended recipient(s), you are hereby notified \
that any disclosure, copying, distribution, or use of this email message is \
prohibited.  If you have received this message in error, please notify the sender \
immediately by e-mail and delete this email message from your computer. Thank you.  \
[[alternative HTML version deleted]]

_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel


[prev in list] [next in list] [prev in thread] [next in thread]