[prev in list] [next in list] [prev in thread] [next in thread] 

List:       bioc-devel
Subject:    Re: [Bioc-devel] The warning about 'biocLite()'
From:       r04945002 () ntu ! edu ! tw
Date:       2018-08-27 20:31:50
Message-ID: 20180828043150.98697dkv4m0j9ad2 () wmail1 ! cc ! ntu ! edu ! tw
[Download RAW message or body]

Ok, Thank you very much.

Best,
Ti Tai

=E5=BC=95=E8=BF=B0 "Shepherd, Lori" <Lori.Shepherd@RoswellPark.org>:

> Your package does look clean for BiocInstaller/biocLite -  looking  =

> at the dependency I think this is coming from when your package is  =

> Installed and from the dependency gage  that has not been updated  =

> yet.   I think you can safely ignore this warning and when gage is  =

> updated it should automatically disappear.
>
>
> Cheers,
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Cancer Institute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
>
> ________________________________
> From: r04945002@ntu.edu.tw <r04945002@ntu.edu.tw>
> Sent: Monday, August 27, 2018 3:27:39 AM
> To: Shepherd, Lori
> Cc: bioc-devel
> Subject: Re: [Bioc-devel] The warning about 'biocLite()'
>
> Hi,
>
> It's anamiR.
>
> Best,
> Ti Tai Wang
>
> =E5=BC=95=E8=BF=B0 "Shepherd, Lori" <Lori.Shepherd@RoswellPark.org>:
>
>> What is the name of your package?
>>
>>
>> It is possible it could be coming from one of the packages you
>> depend or import.  If you are sure you replaced all the instances in
>> your package this could be the case.
>>
>>
>> Lori Shepherd
>>
>> Bioconductor Core Team
>>
>> Roswell Park Cancer Institute
>>
>> Department of Biostatistics & Bioinformatics
>>
>> Elm & Carlton Streets
>>
>> Buffalo, New York 14263
>>
>> ________________________________
>> From: Bioc-devel <bioc-devel-bounces@r-project.org> on behalf of
>> r04945002@ntu.edu.tw <r04945002@ntu.edu.tw>
>> Sent: Sunday, August 26, 2018 4:26:05 PM
>> To: bioc-devel
>> Subject: [Bioc-devel] The warning about 'biocLite()'
>>
>> Hi,
>>
>> I have already use 'BiocManager' to replace every 'biocLite' in my
>> code, like vignette and README, but I still got "Warning:
>> 'BiocInstaller' and 'biocLite()' are deprecated, use the 'BiocManager'
>> CRAN" in my report. Any suggestion?
>>
>> Best,
>> Ti Tai
>>
>> _______________________________________________
>> Bioc-devel@r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>
>>
>> This email message may contain legally privileged and/or
>> confidential information.  If you are not the intended recipient(s),
>> or the employee or agent responsible for the delivery of this
>> message to the intended recipient(s), you are hereby notified that
>> any disclosure, copying, distribution, or use of this email message
>> is prohibited.  If you have received this message in error, please
>> notify the sender immediately by e-mail and delete this email
>> message from your computer. Thank you.
>
>
>
>
> This email message may contain legally privileged and/or  =

> confidential information.  If you are not the intended recipient(s),  =

> or the employee or agent responsible for the delivery of this  =

> message to the intended recipient(s), you are hereby notified that  =

> any disclosure, copying, distribution, or use of this email message  =

> is prohibited.  If you have received this message in error, please  =

> notify the sender immediately by e-mail and delete this email  =

> message from your computer. Thank you.

_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
[prev in list] [next in list] [prev in thread] [next in thread]