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List:       bioc-devel
Subject:    Re: [Bioc-devel] Commit changes to an existing package using the GitHub repositories
From:       "Turaga, Nitesh" <Nitesh.Turaga () RoswellPark ! org>
Date:       2017-08-24 16:08:45
Message-ID: 2E374AF7-D76B-431A-BDC5-5FA46F6223A0 () roswellpark ! org
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Hi Gabriela,


> On Aug 24, 2017, at 12:01 PM, Gabriela Merino <gmerino@bdmg.com.ar> wrote:
> 
> I followed the Bioc instructions and pushed my changes (fixing a bug error( on \
> release and devel. But, I can't see the changes on GitHub \
> (https://github.com/Bioconductor-mirror/TarSeqQC). Is this automatic or can take \
> time?

I see on the git-server that your changes have been made. Regarding the \
bioconductor-mirror (the link you refer to), that is stagnant, i.e, we will be \
deprecating that mirror entirely. So you will not see any further changes on that. \
(https://stat.ethz.ch/pipermail/bioc-devel/2017-August/011329.html)

If you intend to maintain a Github version of your package (a lot of maintainers do), \
then please follow this link. \
(http://bioconductor.org/developers/how-to/git/maintain-github-bioc/). 

Once you go through those steps, you are responsible for maintaining your package on \
Github. You can follow the rest of the help page and the FAQ section for more \
information. If you have ay further questions, feel free to post on this thread.

Best,

Nitesh


> Thank you.
> 
> 
> 
> 2017-08-24 10:59 GMT-03:00 Turaga, Nitesh <Nitesh.Turaga@roswellpark.org>:
> Please try again, your key has been added.
> 
> 
> > On Aug 24, 2017, at 9:53 AM, Gabriela Merino <gmerino@bdmg.com.ar> wrote:
> > 
> > I'm trying to fix a little error in the TarSeqQC plot method using the
> > GitHub repositories. I found the instructions for existing package
> > maintenance here (https://bioconductor.org/developers/how-to/git/
> > maintain-bioc-only/), so I generated an SSH key and then added it to my Git
> > profile (user=gamerino). The added key looks like
> > 
> > ```
> > ssh-rsa AAAAB3NzaC1yc2EAAAABIwAAAQEAklOUpkDHrfHY17SbrmTIpNLTGK9Tjom/BWDSU
> > GPl+nafzlHDTYW7hdI4yZ5ew18JH4JW9jbhUFrviQzM7xlELEVf4h9lFX5QVkbPppSwg0cda3
> > Pbv7kOdJ/MTyBlWXFCR+HAo3FXRitBqxiX1nKhXpHAZsMciLq8V6RjsNAQwdsdMFvSlVK/7XA
> > t3FaoJoAsncM1Q9x5+3V0Ww68/eIFmb1zuUFljQJKprrX88XypNDvjYNby6vw/Pb0rwert/En
> > mZ+AW4OZPnTPI89ZPmVMLuayrD2cE86Z/il8b+gw3r3+1nKatmIkjn2so1d01QraTlMqVSsbx
> > NrRFi9wrf+M7Q==
> > ```
> > 
> > I completed the google form (https://docs.google.com/forms/d/e/
> > 1FAIpQLSdlTbNjsQJDp0BA480vo4tNufs0ziNyNmexegNZgNieIovbAA/viewform) on
> > Tuesday's morning, receiving a message that in the course of a business day
> > I was going to receive the permission.
> > 
> > When I tried to clone the TarSeqQC repository to my PC I obtained
> > 
> > git clone git@git.bioconductor.org:packages/TarSeqQC
> > 
> > Cloning into 'TarSeqQC'...
> > Permission denied (publickey).
> > fatal: Could not read from remote repository.
> > 
> > Please make sure you have the correct access rights
> > and the repository exists.
> > 
> > So I do not know if I've done something wrong or incompletely or I have to
> > wait a little longer for the permissions.
> > 
> > Thank you,
> > 
> > Gabriela
> > 
> > [[alternative HTML version deleted]]
> > 
> > _______________________________________________
> > Bioc-devel@r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
> 
> 
> 
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